Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887627.1_cds_XP_016442039.1_37344
CDS Infomation

[gene=LOC107767521] [db_xref=GeneID:107767521] [protein=beta-xylosidase/alpha-L-arabinofuranosidase 2-like] [protein_id=XP_016442039.1] [location=complement(join(29727..30298,30414..30824,30959..31309,31528..31625,31711..31880,32051..32338,33880..34335))] [gbkey=CDS]
Sequence

ATGAAGAACCGAGGAATGGCCTTTTCATATAATGACAAAAGTAGCCACTACTCTGTTTTT
CTCTACATTATTGGCTTCATGTTTAGTCATTCTCTGTTAGAATTCAAGCCGGTTTTGGCT
CAGAATTCGCCCGTTTTCGCTTGTGATATCACGAGCAATCCTGGGTTAGCGAATTTGACA
TTCTGCGACGCGTCTTTGACCGTGGAAACAAGAGTGAGTGATCTGGTGCAGAGATTGACA
TTGTCTGAAAAGATTGGATTCTTGGTGAGTGGTGCAGGTGGAGTGAGTAGGCTCGGGATT
CCGCGCTACGAGTGGTGGTCTGAGGCATTACATGGAGTTTCATATACTGGTCCAGGAGTA
CATTTCTCTGGTTTGATTCCTGCTGCTACTAGTTTCCCTCAAGTCATTCTAACTGCTGCT
TCTTTCAATGTCACCTTGTTTGAAACCATTGGAAAGGTGGTATCTACCGAGGCTAGGGCA
ATGTATAATGTTGGTTTAGCAGGATTGACATATTGGTCTCCCAATATTAATATTTTCCGC
GACCCGAGATGGGGAAGAGGCCAAGAAACACCAGGAGAAGATCCAACACTCACCAGCAAG
TATGGTGCAGCCTATGTTAGAGGCTTGCAGCAAACAGATGATGGTAGCAAAGATAAGCTC
AAGGTTGCTGCTTGTTGTAAGCATTACACAGCTTATGATGTTGATAATTGGAAAGGAATC
CAAAGATACAATTTCAATGCTGTGGTAACTCAACAAGATATGGATGATACATTTCAACCC
CCATTCAAGAGTTGTGTTCTTGAAGGAAATGTCGCGAGTGTGATGTGTTCATATAACCAA
GTTAATGGCAAGCCAACATGTGGTGATCCAGACCTTCTTGCTGGGATTATCAGAGGAGAA
TGGAATTTAAATGGATATATAGTTACGGATTGTGATTCATTGAATGAGATATTTAATTCT
CAACACTACACCAAAACACCAGAGGAGACTGCAGCTTTGGGTCTAAATTCAGGGGTGGAC
CTGAATTGTGGATCTTGGCTGAGTAAATATACTCAAGGTGCTTTTAACCAAAAACTTGTG
AATGAATCAGTTATTGACAGAGCTATCTCAAACAACTTTGCAACACTAATGAGACTTGGA
TTCTTTGATGGTAATCCAAGAAACCACATTTATGGAAACCTTGGCCCCAAAGATGTCTGC
ACACCGGAAAACCAAGAGCTTGCTCGTGAAGCTGCAAGGCAAGGGATTGTCTTGCTGAAA
AACACTGCAGGATCGCTACCTTTAACTCCCACCGCCATAAAATCCTTAGCAGTCATTGGT
CCTAATGCGAATGTAACCAAAACCATGATTGGCAATTATGAAGGAACCCCATGCAAATAC
ACTACTCCCTTGCAAGGCCTAACAGCCTCAGTTGCCACAATTTACAAGCCTGGATGTTCT
GATGTGTCTTGCAACACTGCCCAACTTGATGATGCTAAGAAAATAGCATCCACAGCTGAT
GCTGTGGTCATGGTAATGGGATCTGATCAATCTATCGAAAGAGAAAGCCTCGACAGAGTT
AATATAACGCTTCCTGGACAACAATCAGTTCTAATAGCAGAGGTTGCTAAAGTTGCCAAG
GGTCCTGTAATTCTAGTTATCATGTCTGGAGGTGGCATGGACGTACAATTTGCAGTCGAT
AATCCTAAGATAACTAGCATTCTTTGGGTTGGTTTCCCTGGAGAAGCCGGTGGTGCTGCC
TTAGCAGATGTCATATTTGGATATTACAATCCAAGTGGAAGGCTACCAATGACATGGTAT
CCACAATCATATGCAGACGCGGTTCCAATGACTATTATGAACATGAGGCCAGATCCTGCC
ACAAACTACCCTGGCAGGACTTATAGGTTCTATACCGGTCCAACTGTTTTTACATTTGGT
CATGGATTAAGCTACTCTCAGTTCAAACACCGCCTAGATCAAGCGCCAACATTTGTATCC
ATCCCTCTCGAGGAAAAACATACTTGTCGTTCAACAAAGTGCAAGTCTATTGATACTGTT
GAGCAAAGTTGCAGCAATTTGGGATTTAATGTTCATCTTAGAGTTAAAAATATGGGAAAG
ATTAGTGGAAGCCATACAATTTTCTTATTCAATTCACCTCCCTCAGTCCATAATGCACCT
CAGAAGCATTTGTTGGGGTTTGAGAAAGTTCATTTGACACCACAAGAAGAAGGGGTTGTT
AAGTTCAATGTAGATGTTTGCAAGCATTTGAGTGGACATGATGAGCTTGGAAACAAGAAA
GTTGCATTAGGACAACACGTTCTTCATATAGGAGATTTGAAGCATTCCTTCACTGTGAAG
ATTTGA

Peptide Sequence

PEP ID

XP_016442039.1
PEP Infomation

PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Nicotiana tabacum]
Sequence

MKNRGMAFSYNDKSSHYSVFLYIIGFMFSHSLLEFKPVLAQNSPVFACDITSNPGLANLT
FCDASLTVETRVSDLVQRLTLSEKIGFLVSGAGGVSRLGIPRYEWWSEALHGVSYTGPGV
HFSGLIPAATSFPQVILTAASFNVTLFETIGKVVSTEARAMYNVGLAGLTYWSPNINIFR
DPRWGRGQETPGEDPTLTSKYGAAYVRGLQQTDDGSKDKLKVAACCKHYTAYDVDNWKGI
QRYNFNAVVTQQDMDDTFQPPFKSCVLEGNVASVMCSYNQVNGKPTCGDPDLLAGIIRGE
WNLNGYIVTDCDSLNEIFNSQHYTKTPEETAALGLNSGVDLNCGSWLSKYTQGAFNQKLV
NESVIDRAISNNFATLMRLGFFDGNPRNHIYGNLGPKDVCTPENQELAREAARQGIVLLK
NTAGSLPLTPTAIKSLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLTASVATIYKPGCS
DVSCNTAQLDDAKKIASTADAVVMVMGSDQSIERESLDRVNITLPGQQSVLIAEVAKVAK
GPVILVIMSGGGMDVQFAVDNPKITSILWVGFPGEAGGAALADVIFGYYNPSGRLPMTWY
PQSYADAVPMTIMNMRPDPATNYPGRTYRFYTGPTVFTFGHGLSYSQFKHRLDQAPTFVS
IPLEEKHTCRSTKCKSIDTVEQSCSNLGFNVHLRVKNMGKISGSHTIFLFNSPPSVHNAP
QKHLLGFEKVHLTPQEEGVVKFNVDVCKHLSGHDELGNKKVALGQHVLHIGDLKHSFTVK
I

Transcript Sequence

Gene sequence data has not been registered.